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 Cell Fates

Regulation of gene expression in a multicellular organism occurs at several levels.  Most of this regulation occurs at the level of transcription.  The impact of this regulation on the cell impacts cell growth, development and death.  All three of these cellular fates have profound impacts on a multicelled organism, from proper development to cancer.

Development

Cell Cycle

Apoptosis

Cancer

Development 

In 1995 the Nobel Prize in Medicine was awarded for the experiments that led to our understanding of development in Drosophila.

Development in a multicellular organism requires the activation of specific genes at specific times.  This is controlled by maternal factors and by cascades of transcription factors. 

Maternal factors, such as the Drosophila transcription factor bicoid, are present in a gradient in a developing embryo. 

 

The transcription factor Bicoid stimulates the production of another transcription factor, Hunchback (Hb).  Bicoid concentrations are highest near the head of the embryo.

Translation of Hb mRNA is blocked by another maternal factor called Nanos that is foud at the tail of the embryo.

 

Hunchback in turn is a transcription factor that turns on the expression of other transcription factors.  This cascade of transcription factors initiates the synthesis of specific genes in specific locations and times during development.

 

 

Cell Cycle 

The 2001 Nobel Prize in Medicine was awarded for work on the regulation of the cell cycle.

 

Researchers mutagenized yeast and discovered several mutants that arrested in specific stages of the cell cycle.  They cloned the genes that had been mutated in each different cell line and identified the genes by DNA sequencing.  One of the proteins (cdc2) was a kinase.

Antibodies were made against cdc2 and it was found that the concentrations of these kinases were present throughout the cell cycle. However, adding radioactive ATP showed that the activity of the kinase peaked during mitosis

When researchers labeled proteins with 35S amino acids in dividing sea urchin eggs, they found that most proteins incorporated increasing label over time. 
 

However, the radioactivity in some proteins increased and then disappeared, only to reappear on the next cell cycle. 

These proteins were named cyclins.

We now know that cyclins bind to and activate kinases.  These activated kinases then phosphorylate proteins, allowing a stage of the cell cycle to proceed.  The next stage of the cell cycle will not start until the cyclins are degraded.

For a much more in-depth exploration of the regulation of the cell cycle, visit this link by Dr. Forsburg at the Salk Institute.

 

Apoptosis 

The 2002 Nobel Prize in Medicine was awarded for research on programmed cell death, or apoptosis.

The nematode C. elegans grows from a single fertilized egg into an adult worm with 959 cells.  In the process 131 cells are programmed to die.  This programmed cell death, or apoptosis is important to the proper development of most multi-celled organisms, including humans.

Scientists were able to generate mutants in apoptosis and isolate four genes which were necessary for apoptosis.

CED-3 and CED-4 mutations resulted in all 1,090 cells appearing in the adult.  CED-3 is a cysteine protease which cuts after aspartate residues.  These enzymes were termed Caspases.

 

Several proteins were discovered to be involved in this apoptosis cascade, including cell surface receptors, mitochondrial proteins and the Caspases .

Caspases also function in a cascade, where Caspase 9 cleaves and activates Caspase 3, which in turn cleaves and activates Caspase 6, etc.

 

Cancer

To fully understand cancer, we need to understand the regulation of the cell cycle and apoptosis.  Cancer occurs when mutations occur in genes that regulate the cell cycle.  Two groups of genes need to be mutated for a tumor to form.

Oncogenes are genes that can lead to uncontrolled growth if they are activated at the wrong time or constitutively.

Tumor suppressors are genes that normally inhibit the cell cycle.  If these activities are lost it can also lead to uncontrolled growth.

 This is analogous to stepping on the gas pedal (activating oncogenes) and cutting the brakes (losing tumor suppressors).

Mutations in oncogenes tend to be dominant, you only need one copy stuck in the “on” position to increase cell division.

Mutations in tumor suppressors tend to be recessive, you need to delete both copies to lose activity.

 

Oncogenes

myc is a transcription factor.  Increased gene expression leads to increased cell division.

Erb is a mutated EGF receptor.  The mutated receptor lacks an extracellular domain and is always on.

Trk is a tyrosine kinase receptor fused with a dimeric protein called tropomyosin through a chromosomal translocation.  This causes the tyrosine kinase to form a permanent dimer and as a result is always “on”.  

Ras is a G-protein.  Can’t hydrolyze GTP and the protein is stuck in the “on” position. 

 

Tumor suppressors

One of the most important tumor suppressors is p53.  Mutations in p53 are found in 50% of all tumors.  p53 regulates a branch point between the normal cell cycle, arrest of the cell cycle and triggering apoptosis.

p53 normally increases the transcription of mdm2, which in turn increases the rate of destruction of p53 in the cell.

If the DNA in a cell is damaged mildly, p53 binds to the DNA, and mdm2 falls off of p53.  As a result, p53 levels increase and an increase in p21 transcription occurs.  p21 triggers arrest of the cell cycle until the DNA damage can be repaired.

If the DNA is damaged severely, p53 becomes phosphorylated, mdm2 falls off of p53, and the phosphorylated p53 triggers apoptosis.